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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs62515567 chr8:82769604 C/A 4.45E-5 113 42.82 35.77 22.5 KM Plot
THYM rs6443266 chr3:9841989 A/G 2.64E-8 108 43.97 50.47 35 KM Plot
THYM rs6497759 chr16:24801737 G/A 4.28E-5 113 46.6 30.03 50.1 KM Plot
THYM rs6543676 chr2:33000891 T/C 8.29E-13 113 46.43 26.57 0.9 KM Plot
THYM rs6710626 chr2:32977007 A/C 1.06E-12 112 49.5 26.2 0.9 KM Plot
THYM rs6729463 chr2:33005238 A/G 0 113 46.43 25.18 0.13 KM Plot
THYM rs6736866 chr2:73661986 C/G 6.65E-5 110 37.63 46.6 32.7 KM Plot
THYM rs6755217 chr2:73641285 C/T 6.61E-8 109 37.63 46.27 34.83 KM Plot
THYM rs6755241 chr2:73641364 C/T 3.3E-6 111 38.13 45.87 12.9 KM Plot
THYM rs6790231 chr3:9855904 C/T 0 112 36.4 53.22 18 KM Plot
THYM rs68189223 chr2:32986961 GAATA/G 1.06E-12 112 46.6 26.57 0.9 KM Plot
THYM rs6939651 chr6:167532740 T/G 3.03E-9 112 38.48 49.75 9.83 KM Plot
THYM rs6963784 chr7:76131812 C/G 2.57E-5 112 38.33 46.23 25.83 KM Plot
THYM rs6977748 chr7:105167462 T/G 4.48E-6 112 37.13 50.13 51.7 KM Plot
THYM rs7102858 chr11:62044545 C/A 2.36E-6 112 44.38 38.33 10.83 KM Plot